[HARDWARE ISSUE]USB ports work intermittently, or not at all

I have this motherboard. It has 6 USB2.0 ports, 2 USB3.0 ports, and PS/2 mouse and keyboard. The 3.0's are the only ones that work reliably, so they're reserved for the keyboard and mouse. But they only detect when Mageia itself starts, so no keyboard in POST or GRUB. This isn't a problem 99% of the time, but now I have to go into BIOS for a different issue. I never use the 2.0 or PS/2 ports because they don't work often enough to be useful.
Here's dmesg output
And lspcidrake
I'm currently using Mageia 4, and holding off on the upgrade until I can work out this and a few other issues. Since it's a UEFI board, is there a chance upgrading would help?
Edit: terminology
Here's dmesg output
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[sks@localhost ~]$ dmesg | grep hci
[ 0.635670] ahci 0000:00:11.0: version 3.0
[ 0.635842] ahci 0000:00:11.0: AHCI 0001.0200 32 slots 4 ports 6 Gbps 0xf impl SATA mode
[ 0.635845] ahci 0000:00:11.0: flags: 64bit ncq sntf ilck pm led clo pmp pio slum part
[ 0.636368] scsi0 : ahci
[ 0.636480] scsi1 : ahci
[ 0.636573] scsi2 : ahci
[ 0.636665] scsi3 : ahci
[ 3.090559] xhci_hcd 0000:02:00.0: xHCI Host Controller
[ 3.090566] xhci_hcd 0000:02:00.0: new USB bus registered, assigned bus number 1
[ 3.090661] xhci_hcd 0000:02:00.0: irq 72 for MSI/MSI-X
[ 3.090736] usb usb1: Manufacturer: Linux 3.14.43-desktop-1.mga4 xhci_hcd
[ 3.091025] xhci_hcd 0000:02:00.0: xHCI Host Controller
[ 3.091031] xhci_hcd 0000:02:00.0: new USB bus registered, assigned bus number 2
[ 3.091101] usb usb2: Manufacturer: Linux 3.14.43-desktop-1.mga4 xhci_hcd
[ 3.392444] usb 1-1: new low-speed USB device number 2 using xhci_hcd
[ 3.662464] usb 1-2: new full-speed USB device number 3 using xhci_hcd
And lspcidrake
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[sks@localhost ~]$ lspcidrake -v
ath9k : Qualcomm Atheros|AR9485 Wireless Network Adapter [NETWORK_OTHER] (vendor:168c device:0032 subv:168c subd:3118) (rev: 01)
tg3 : Broadcom Corporation|NetLink BCM57781 Gigabit Ethernet PCIe [NETWORK_ETHERNET] (vendor:14e4 device:16b1 subv:1849 subd:96b1) (rev: 10)
xhci_hcd : Etron Technology, Inc.|EJ168 USB 3.0 Host Controller [SERIAL_USB] (vendor:1b6f device:7023 subv:1849 subd:7023) (rev: 01)
snd_hda_intel : Advanced Micro Devices, Inc. [AMD/ATI]|Cape Verde/Pitcairn HDMI Audio [Radeon HD 7700/7800 Series] [MULTIMEDIA_AUDIO_DEV] (vendor:1002 device:aab0 subv:1092 subd:aab0)
Card:ATI Radeon HD 5000 to HD 6300 (radeon/fglrx): Advanced Micro Devices, Inc. [AMD/ATI]|Cape Verde XT [Radeon HD 7770/8760 / R7 250X] [DISPLAY_VGA] (vendor:1002 device:683d subv:1092 subd:e244)
shpchp : Advanced Micro Devices, Inc. [AMD/ATI]|RD890 PCI to PCI bridge (external gfx1 port A) [BRIDGE_PCI] (vendor:1002 device:5a1d)
unknown : Advanced Micro Devices, Inc. [AMD]|Family 15h Processor Function 5 [BRIDGE_HOST] (vendor:1022 device:1605)
fam15h_power : Advanced Micro Devices, Inc. [AMD]|Family 15h Processor Function 4 [BRIDGE_HOST] (vendor:1022 device:1604)
k10temp : Advanced Micro Devices, Inc. [AMD]|Family 15h Processor Function 3 [BRIDGE_HOST] (vendor:1022 device:1603)
amd64_edac_mod : Advanced Micro Devices, Inc. [AMD]|Family 15h Processor Function 2 [BRIDGE_HOST] (vendor:1022 device:1602)
unknown : Advanced Micro Devices, Inc. [AMD]|Family 15h Processor Function 1 [BRIDGE_HOST] (vendor:1022 device:1601)
unknown : Advanced Micro Devices, Inc. [AMD]|Family 15h Processor Function 0 [BRIDGE_HOST] (vendor:1022 device:1600)
shpchp : Advanced Micro Devices, Inc. [AMD/ATI]|SB700/SB800/SB900 PCI to PCI bridge (PCIE port 0) [BRIDGE_PCI] (vendor:1002 device:43a0)
unknown : Advanced Micro Devices, Inc. [AMD/ATI]|SBx00 PCI to PCI Bridge [BRIDGE_PCI] (vendor:1002 device:4384) (rev: 40)
unknown : Advanced Micro Devices, Inc. [AMD/ATI]|SB7x0/SB8x0/SB9x0 LPC host controller [BRIDGE_ISA] (vendor:1002 device:439d subv:1849 subd:439d) (rev: 40)
snd_hda_intel : Advanced Micro Devices, Inc. [AMD/ATI]|SBx00 Azalia (Intel HDA) [MULTIMEDIA_AUDIO_DEV] (vendor:1002 device:4383 subv:1849 subd:7892) (rev: 40)
pata_atiixp : Advanced Micro Devices, Inc. [AMD/ATI]|SB7x0/SB8x0/SB9x0 IDE Controller [STORAGE_IDE] (vendor:1002 device:439c subv:1849 subd:439c) (rev: 40)
i2c_piix4 : Advanced Micro Devices, Inc. [AMD/ATI]|SBx00 SMBus Controller [SERIAL_SMBUS] (vendor:1002 device:4385 subv:1849 subd:4385) (rev: 42)
unknown : Advanced Micro Devices, Inc. [AMD/ATI]|SB7x0/SB8x0/SB9x0 SATA Controller [IDE mode] [STORAGE_SATA] (vendor:1002 device:4390 subv:1849 subd:4390) (rev: 40)
shpchp : Advanced Micro Devices, Inc. [AMD/ATI]|RD890 PCI to PCI bridge (PCI express gpp port E) [BRIDGE_PCI] (vendor:1002 device:5a19)
shpchp : Advanced Micro Devices, Inc. [AMD/ATI]|RD890 PCI to PCI bridge (PCI express gpp port B) [BRIDGE_PCI] (vendor:1002 device:5a16)
unknown : Advanced Micro Devices, Inc. [AMD/ATI]|RD890 PCI to PCI bridge (external gfx0 port B) [BRIDGE_HOST] (vendor:1002 device:5a14 subv:1849 subd:5a14) (rev: 02)
hub : Linux 3.14.43-desktop-1.mga4 xhci_hcd|xHCI Host Controller [Hub|Unused|Full speed (or root) hub] (vendor:1d6b device:0003)
hub : Linux 3.14.43-desktop-1.mga4 xhci_hcd|xHCI Host Controller [Hub|Unused|Full speed (or root) hub] (vendor:1d6b device:0002)
usbhid : Logitech|USB Keyboard [Human Interface Device|Boot Interface Subclass|Keyboard] (vendor:046d device:c31c)
usbhid : Logitech|USB Receiver [Human Interface Device|Boot Interface Subclass|Keyboard] (vendor:046d device:c52b)
hid_generic : Logitech USB Keyboard
hid_generic : Logitech USB Keyboard
hid_logitech_dj : Logitech USB Receiver
hid_logitech_dj : Logitech USB Receiver
hid_logitech_dj : Logitech USB Receiver
hid_logitech_dj : Logitech Unifying Device. Wireless PID:400a
I'm currently using Mageia 4, and holding off on the upgrade until I can work out this and a few other issues. Since it's a UEFI board, is there a chance upgrading would help?
Edit: terminology